Law Minister Ravi Shankar Prasad also defended the government move to ask the Supreme Court collegium, or a group of five most-senior judges, to reconsider its decision. Mr Prasad told reporters that there was nothing wrong in the government exercising the right to seek reconsideration of a name recommended by the collegium and this was a power given the centre by the Supreme Court.
In his letter to the government last month, Mr Prasad had asked the top judges to be "objective and fair" and reconsider their choice. It had also asked that the collegium explain why Justice Joseph was chosen despite other judges being senior to him.
The Congress alleges that the government is punishing Justice Joseph for his decision to cancel central rule in Uttarakhand in 2016. It is an assessment shared by many in the legal community including ex-judges who have called the centre's move an attack at the heart of judicial independence.
Mr Prasad said it wasn't true that the decision was linked to Justice Joseph's judicial verdict.
"I wish to deny that Justice Joseph's appointment was halted due to his Uttarakhand president's rule verdict," the Law Minister said.