"It is the first since creation of the republic," a government source told AFP today.
"Churches have been restored and reopened to the public, but no new church has been built until now," he added.
Turkey, which once had large Christian minorities, is now 99 per cent Muslim, and critics of the ruling party AKP have accused it of trying to Islamicise its officially secular society.
However, as part of its bid to join the European Union, Amlara has made efforts to widen minority rights and return some seized property and restore churches, monasteries and synagogues.
The country's ancient Syriac minority, which now numbers less than 20,000, live mostly in the southeast, and tend to be either Orthodox or Catholic.
The church will be built on land given by the local council and paid for by a Syriac group, the government spokesman, who asked not to be named, said.